HOMD :: Human Oral Microbiome Database

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16S rRNA RefSeq
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16S rRNA Refseq Genomic RefSeq

HOMD Genomes

Navigate genomes by Phylum:

Navigate genomes by alphabet:
A|B|C|D|E|F|G|H|I|J|K|L|M|N|O|P|Q|R|S|T|U|V|W|X|Y|Z|All Entries: 2109 genomes

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In: Matching
	Sequencing Status: All Complete High Coverage Survey
	Annotation: All HOMD with StaticHOMD onlyStatic onlyNon-oral/nasal

No. of genomes starting with N: 38

Taxon ID*

Genus *

Species *

Strain/Culture
Collection *

SEQ ID *

No. of
contigs
& plasmids *

Combined
length (bp) *

GC
(%)

Genome Info and Tools

Available Annotations

HMT-013

Neisseria

bacilliformis

ATCC BAA-1200

SEQF1969

2,470,575

60.2

HOMD

Neisseria

cinerea

atcc_14685

SEQF2899

1,872,773

50.8

HOMD

Neisseria

elongata

ATCC 29315

SEQF1166

153

2,275,949

54.0

HOMD

Neisseria

flavescens

SK114

SEQF1790

2,204,114

49.3

HOMD

Neisseria

flavescens

NRL30031/H210

SEQF1195

117

2,205,588

49.2

HOMD

Neisseria

gonorrhoeae

DGI2

SEQF1794

2,175,771

54.3

HOMD

Neisseria

gonorrhoeae

FA 1090, ATCC 700825

SEQF1272

2,153,922

52.7

HOMD

Neisseria

gonorrhoeae

NCCP11945

SEQF1109

2,236,178

52.4

HOMD

Neisseria

lactamica

020-06

SEQF2159

2,220,606

52.3

HOMD

Neisseria

lactamica

ATCC 23970

SEQF1261

101

2,171,992

52.2

HOMD

Neisseria

lactamica

Y92-1009

SEQF2141

2,023,964

52.4

HOMD

Neisseria

macacae

atcc_33926

SEQF2876

2,748,368

52.4

HOMD

Neisseria

meningitidis

WUE 2594

SEQF2288

2,227,255

51.8

HOMD

Neisseria

meningitidis

MC58

SEQF1276

2,272,360

51.5

HOMD

Neisseria

meningitidis

alpha710

SEQF2284

2,242,947

51.7

HOMD

Neisseria

meningitidis

053442

SEQF1100

2,153,416

51.7

HOMD

Neisseria

meningitidis

NZ-05/33

SEQF2287

2,248,966

51.3

HOMD

Neisseria

meningitidis

serogroup C, FAM18

SEQF1275

2,194,961

51.6

HOMD

Neisseria

meningitidis

serogroup A, Z2491

SEQF1283

2,184,406

51.8

HOMD

Neisseria

meningitidis

H44/76

SEQF2286

2,240,883

51.5

HOMD

Neisseria

meningitidis

alpha14

SEQF1723

2,145,295

52.0

HOMD

Neisseria

meningitidis

961-5945

SEQF2329

166

2,227,211

51.7

HOMD

Neisseria

meningitidis

8013 (serogroup C)

SEQF1277

2,277,550

51.4

HOMD

Neisseria

meningitidis

ATCC 13091

SEQF1916

2,262,611

54.1

HOMD

Neisseria

meningitidis

G2136

SEQF2285

2,184,862

51.7

HOMD

Neisseria

mucosa

ATCC 25996

SEQF1175

2,578,748

51.1

HOMD

Neisseria

mucosa

C102

SEQF2142

2,169,437

49.8

HOMD

Neisseria

oralis

F0314

SEQF1659

2,515,760

53.1

HOMD

Neisseria

perflava

CCH6-A12

SEQF3089

279

3,783,369

68.7

HOMD

Neisseria

perflava

UMB0023

SEQF3153

2,319,022

48.8

HOMD

Neisseria

polysaccharea

ATCC 43768

SEQF1183

139

2,030,958

52.0

HOMD

Neisseria

sicca

ATCC 29256

SEQF1264

2,830,772

50.9

HOMD

Neisseria

sicca

VK64

SEQF2351

210

2,638,449

51.2

HOMD

Neisseria

sp. HMT 020

F0370

SEQF1944

118

2,358,903

58.7

HOMD

Neisseria

subflava

NJ9703

SEQF1165

2,292,986

49.0

HOMD

Neisseria

weaveri

LMG 5135

SEQF2331

2,183,368

49.0

HOMD

Neisseria

weaveri

ATCC 51223

SEQF2330

2,125,582

49.0

HOMD

Novosphingobium

panipatense

P5:ABC

SEQF3086

5,735,120

64.7

HOMD

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Data last updated on :2022-02-10 10:34:28

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