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Page: GN1
16S rRNA Refseq
Genomic RefSeq
Genome Explorer --
Genome:
None
Selected tool:
Blast Against Genome
Select a genome:
BLAST against all human oral microbial genomes
Program
blastn
blastp
blastx
tblastn
tblastx
Database
All oral microbial genome ORFs (n.a.)
All oral microbial genome ORFs (n.a.) annotated by HOMD
All oral microbial genomic DNAs
All oral microbial genomic DNAs annotated by HOMD
Enter sequence below in
FASTA
format
Or load it from disk
The query sequence is
filtered
for low complexity regions by default.
Filter
Low complexity
Mask for lookup table only
Expect
0.0001
0.01
1
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1000
Other advanced options:
Graphical Overview
Alignment view
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
Blast XML
Descriptions
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5000
Alignments
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This is an NCBI Blast program customized by HOMD. Please send comments and suggestions to:<
homd-info @ homd.org
>
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Selected tool: Blast Against Genome
