| Author |
Message |
|
|
Post subject: Genome Annotation Update - Streptococcus sanguinis SK36
 Posted: Feb 26, 2016 - 06:13 AM
|
|
Joined: Dec 31, 1969
Posts: 16777215
|
|
Automatic annotation for the genome - Streptococcus sanguinis SK36 has been updated. Please visit HOMD web site to view the genome:
Link to HOMD Genome Viewer
Link to HOMD Dynamic Annotation
Summary of the annotation:
Full Name: Streptococcus sanguinis SK36
SEQ_ID: SEQF1070
Total contigs received: 1
Total bps received: 2388435
Average GC%: 43.4 (of total bps received)
Longest contig: 2388435 bps
Shortest contig: 2388435 bps
Contigs 100 - 300 bps: 0
Contigs 301 - 500 bps: 0
Contigs 501 - 1000 bps: 0
Contigs 1001 - 1500 bps: 0
Contigs > 1500 bps: 1
Total ORFs*: 2320
Total BLASTP hits against NCBI nr: 2301
NCBI nr protein database dated: 2014-12-02
Total BLASTP hits against SwissProt: 1630
SwissProt protein database dated: 2014-12-01
ORFs with KEGG hits: 632
ORFs with GO hits: 204
* Minimal size of ORFs annotated by GeneMarkS = 50 a.a. (150 n.a.)
Please address your questions to homd_curator@homd.org
~The HOMD Team~ |
|
|
| |
|
|
|
 |
|
|
|
|
