16S rRNA Refseq V15.23 Genomic RefSeq V10.1
Sequence Meta Information:
Atopobium rimae ATCC 49626, VPI D140H-11A
Info available in HOMD database:  
1Oral Taxon ID750
2HOMD Sequence IDSEQF1003
3HOMD Name (Genus, Species)Atopobium rimae
4Genome Sequence Name
(Name associated with genomic sequence)		Atopobium rimae
5Comments on Name
6Culture Collection Entry NumberATCC 49626, VPI D140H-11A
7Isolate OriginGingival crevice
8Sequencing StatusHigh Coverage
9NCBI Taxonomy ID553184
10NCBI Genome BioProject ID30999
11NCBI Genome BioSample IDSAMN00000717
12GenBank Accession IDACFE00000000.1
13Genbank Assembly IDGCA_000174015.1
14Number of Contigs and Singlets9
15Combined Length (bps)1,626,291
16GC Percentage49.26
17Sequencing CenterJ. Craig Venter Institute - The Forsyth Institute
18ATCC Medium Number1482
19Non-ATCC MediumNA
2016S rRNA Gene Sequence
 
>SEQF1003 Atopobium rimae strain ATCC 49626, oral taxon 750, 16S ribosomal RNA gene, partial sequence
GAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATGCAAGTCGAACGGTTAAAGCACCTTTTAGGTGTGTATAAAGTGGCGAACGGCTGAGTAACACGTGG
GCAACCTGCCCTCCTCTTGGGGATAGCCTCGGGAAACCGAGGATAATACCCGATACTTCAATGTGGCCGCATGACGACATTGAGAAAGCTTTTGCGGAGAAGGATGGGCCCGCG
GCCTGTTAGCTTGTTGGTGGGGTAGAGGCCTACCAAGGCAATGATGGGTAGCTGGGTTGAGAGACCGACCAGCCAGATTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC
AGCAGTGGGGAATCTTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGCGGGACGAAGGCCTTCGGGTTGTAAACCGCTTTCAGCAGGGACGAGGCGAAAGTGACGGT
ACCTGCAGAAGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGATTCATTGGGCGTAAAGCGCTCGTAGGCGGTCTGTTAGGTCG
GGAGTTAAATCCGGAGGCTCAACCTCCGCCCGCTCCCGATACCGGCAGACTTGAGTTTGGTAGGGGAAGGTGGAATTCCTAGTGTAGCGGTGGAATGCGCAGATATTAGGAAGA
ACACCAGTGGCGAAGGCGGCCTTCTGGGCCATAACTGACGCTGAGGAGCGAAAGCTAGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCTAGCTGTAAACGATGGACACTAG
GTGTGGGAGAATACGTCTTCCGTGCCGCAGCTAACGCATTAAGTGTCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCAGCGG
AGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATGTAGGTGAAGCGGCGGAAACGTCGTGGCCGAAAGGAGCCTACACAGGTGGTGCATGGCTGTC
GTCAGCTCGTGTCGTGAGATGTTAGGTTAAGTCCTGCAACGAGCGCAACCCTCGTCGTATATTGCCAGCGGTTCGGCCGGGCACCTATACGAGACCGCCGGCGTCAAGCCGGAG
GAAGGTGGGGACGACGTCAAGTCATCATGCCCCTTATGTCCTGGGCTACACACGTGCTACAATGGCCGGCACAATGAGCTGCCAACCCGCAAGGGCGAGCGAATCTCTAAAGCC
GGTCCCAGTTCGGATTGGAGGCTGCAACCCGCCTCCATGAAGTCGGAGTTGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATGCGTTCCCGGGTCTTGTACACACCGCCCGT
CACACCACCCGAGTCGATTGCACCCGAAGTCGTCGGCCTAACCTTTTAGGAGGGAGACGCCGAAGGTGTGGTTGGTAAGGGGGGTGAAGTCGTAACAAGGTAGCCGTACCGGAA
GGTGC
21Comments for 16s rRNA Gene Sequence
Copyright 2007-2024 The Forsyth Institute
Hosted on Amazon AWS EC2
192.168.0.51