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Post subject: Genome Annotation Update - Streptococcus pyogenes MGAS10270
 Posted: Feb 25, 2016 - 04:13 PM
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Joined: Dec 31, 1969
Posts: 16777215
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Automatic annotation for the genome - Streptococcus pyogenes MGAS10270 has been updated. Please visit HOMD web site to view the genome:
Link to HOMD Genome Viewer
Link to HOMD Dynamic Annotation
Summary of the annotation:
Full Name: Streptococcus pyogenes MGAS10270
SEQ_ID: SEQF1356
Total contigs received: 1
Total bps received: 1928252
Average GC%: 38.43 (of total bps received)
Longest contig: 1928252 bps
Shortest contig: 1928252 bps
Contigs 100 - 300 bps: 0
Contigs 301 - 500 bps: 0
Contigs 501 - 1000 bps: 0
Contigs 1001 - 1500 bps: 0
Contigs > 1500 bps: 1
Total ORFs*: 1964
Total BLASTP hits against NCBI nr: 1954
NCBI nr protein database dated: 2014-12-02
Total BLASTP hits against SwissProt: 1359
SwissProt protein database dated: 2014-12-01
ORFs with KEGG hits: 479
ORFs with GO hits: 156
* Minimal size of ORFs annotated by GeneMarkS = 50 a.a. (150 n.a.)
Please address your questions to homd_curator@homd.org
~The HOMD Team~ |
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