.scale {font-family:arial} eHOMD Genomic 16S rRNA Gene Tree Version 9.15 16S rRNA genes identified from 1,984 genomes in 533 taxa Tree constructed on 2022-02-09 using FastTree version 2.1.10.Dbl Preferred Habitat: 👄 Oral 👃 Nasal Vaginal Unassigned None Oral/Nasal Reference Genome HMT-815 SEQF2671 Methanobrevibacter oralis JMR01 (2,107,831 bps in 14 contigs) — 1/1 16S rRNA (1,473 nt) 👄 0.000573941 HMT-815 SEQF3103 Methanobrevibacter oralis M2 CSUR P5920 (2,124,480 bps in 106 contigs) — 1/1 16S rRNA (1,475 nt) 👄 0.000000005 HMT-815 SEQF3102 Methanobrevibacter oralis DSM 7256 (2,140,433 bps in 136 contigs) — 1/1 16S rRNA (1,475 nt) 👄 0.000572292 0.000 0.000000005 1.000 0.112406 HMT-619 SEQF3184 Porphyromonas gingivalis SJD4 (2,249,706 bps in 147 contigs) — 2/2 16S rRNAs (787 nt) 👄 0.003988301 HMT-643 SEQF3523 Prevotella intermedia ATCC 49046 (2,673,161 bps in 55 contigs) — 2/2 16S rRNAs (440 nt) 👄 0.010406448 1.000 0.089036768 HMT-686 SEQF3343 Streptococcus mutans G123 (1,977,039 bps in 122 contigs) — 2/2 16S rRNAs (436 nt) 👄 0.000000005 HMT-686 SEQF3396 Streptococcus mutans ATCC 55676 (2,050,195 bps in 24 contigs) — 2/2 16S rRNAs (929 nt) 👄 0.000000005 0.998 0.052362852 1.000 0.389581447 HMT-874 SEQF2626 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 MGEHA (1,109,712 bps in 62 contigs) — 1/1 16S rRNA (1,487 nt) 👄 0.061670441 HMT-991 SEQF3107 Absconditabacteria_(SR1)_[G-1] bacterium_HMT_991 RAAC1_SR1_1 (1,177,760 bps in 1 contig) — 1/1 16S rRNA (1,492 nt) 0.045388958 1.000 0.145704390 HMT-996 SEQF2724 Gracilibacteria_(GN02)_[G-3] bacterium_HMT_996 JGI 0000069-P22 (341,011 bps in 30 contigs) — 1/1 16S rRNA (1,465 nt) 0.156704315 HMT-632 SEQF1722 Mycoplasma hominis ATCC 23114 (665,445 bps in 1 contig) — 1/2 16S rRNAs (1,506 nt) 0.0 HMT-632 SEQF1722 Mycoplasma hominis ATCC 23114 (665,445 bps in 1 contig) — 2/2 16S rRNAs (1,506 nt) 0.0 0.019720978 HMT-704 SEQF2553 Mycoplasma orale ATCC 23714 (710,549 bps in 21 contigs) — 1/1 16S rRNA (1,506 nt) 👄 0.009914972 HMT-754 SEQF2607 Mycoplasma salivarium ATCC 23064 (713,526 bps in 17 contigs) — 1/1 16S rRNA (1,510 nt) 👄 0.010541792 0.842 0.012397320 1.000 0.040900191 HMT-607 SEQF1928 Mycoplasmopsis fermentans JER (977,524 bps in 1 contig) — 2/2 16S rRNAs (1,501 nt) 0.000509371 HMT-607 SEQF1263 Mycoplasmopsis fermentans M64 (1,118,751 bps in 1 contig) — 2/2 16S rRNAs (1,501 nt) 0.000000005 0.858 0.000509158 HMT-607 SEQF1263 Mycoplasmopsis fermentans M64 (1,118,751 bps in 1 contig) — 1/2 16S rRNAs (1,501 nt) 0.0 HMT-607 SEQF1265 Mycoplasmopsis fermentans PG18 (1,004,014 bps in 1 contig) — 1/1 16S rRNA (1,501 nt) 0.0 HMT-607 SEQF1928 Mycoplasmopsis fermentans JER (977,524 bps in 1 contig) — 1/2 16S rRNAs (1,501 nt) 0.0 0.000000005 1.000 0.059312867 1.000 0.054819199 HMT-732 SEQF2571 Mycoplasma pneumoniae M129-B7 (816,451 bps in 1 contig) — 1/1 16S rRNA (1,504 nt) 0.000000005 HMT-732 SEQF1271 Mycoplasma pneumoniae M129 (816,394 bps in 1 contig) — 1/1 16S rRNA (1,504 nt) 0.0 HMT-732 SEQF2156 Mycoplasma pneumoniae 309 (817,176 bps in 1 contig) — 1/1 16S rRNA (1,504 nt) 0.0 HMT-732 SEQF2157 Mycoplasma pneumoniae FH (811,088 bps in 1 contig) — 1/1 16S rRNA (1,504 nt) 0.0 0.000492495 0.945 0.006314496 HMT-616 SEQF1267 Mycoplasma genitalium G37 (580,076 bps in 1 contig) — 1/1 16S rRNA (1,506 nt) 0.0 HMT-616 SEQF2779 Mycoplasma genitalium JCVI-1.0 (582,970 bps in 1 contig) — 1/1 16S rRNA (1,506 nt) 0.0 0.000000005 HMT-616 SEQF2378 Mycoplasma genitalium M6320 (579,796 bps in 1 contig) — 1/1 16S rRNA (1,506 nt) 0.000486940 HMT-616 SEQF2377 Mycoplasma genitalium M6282 (579,504 bps in 1 contig) — 1/1 16S rRNA (1,506 nt) 0.000486487 HMT-616 SEQF2375 Mycoplasma genitalium M2288 (579,558 bps in 1 contig) — 1/1 16S rRNA (1,506 nt) 0.0 HMT-616 SEQF2376 Mycoplasma genitalium M2321 (579,977 bps in 1 contig) — 1/1 16S rRNA (1,506 nt) 0.0 0.000486469 0.000 0.000000005 0.000 0.000000006 0.966 0.006437596 1.000 0.160835589 0.997 0.042484361 HMT-987 SEQF2722 Saccharibacteria_(TM7)_[G-7] bacterium_HMT_987 GTL1 (679,415 bps in 132 contigs) — 1/1 16S rRNA (1,500 nt) 0.050696244 HMT-989 SEQF2737 Saccharibacteria_(TM7)_[G-7] bacterium_HMT_989 RAAC3_TM7_1 (845,464 bps in 1 contig) — 1/1 16S rRNA (1,592 nt) 0.048331018 HMT-986 SEQF2723 Saccharibacteria_(TM7)_[G-7] bacterium_HMT_986 JGI 0001002-L20 (752,653 bps in 68 contigs) — 1/1 16S rRNA (1,464 nt) 0.016948550 HMT-988 SEQF2721 Candidatus_Saccharimonas aalborgensis NA (1,013,781 bps in 1 contig) — 1/1 16S rRNA (1,491 nt) 0.034745242 HMT-955 SEQF3099 Saccharibacteria_(TM7)_[G-8] bacterium_HMT_955 PM004 (842,202 bps in 1 contig) — 1/1 16S rRNA (1,463 nt) 👄 0.000000005 HMT-955 SEQF3135 Saccharibacteria_(TM7)_[G-8] bacterium_HMT_955 FS14P (873,056 bps in 1 contig) — 1/1 16S rRNA (1,471 nt) 👄 0.000000005 HMT-955 SEQF3136 Saccharibacteria_(TM7)_[G-8] bacterium_HMT_955 FS17P (885,960 bps in 1 contig) — 1/1 16S rRNA (1,472 nt) 👄 0.0 HMT-955 SEQF3140 Saccharibacteria_(TM7)_[G-8] bacterium_HMT_955 CM003 (835,009 bps in 1 contig) — 1/1 16S rRNA (1,472 nt) 👄 0.0 HMT-955 SEQF3142 Saccharibacteria_(TM7)_[G-8] bacterium_HMT_955 CM009 (841,891 bps in 1 contig) — 1/1 16S rRNA (1,472 nt) 👄 0.0 0.000000005 0.000 0.000000005 0.980 0.009925854 HMT-349 SEQF3678 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 PM007 (1,021,750 bps in 1 contig) — 1/1 16S rRNA (1,473 nt) 👄 0.015114309 HMT-957 SEQF3100 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 BB001 (782,344 bps in 1 contig) — 1/1 16S rRNA (1,464 nt) 👄 0.000000005 HMT-952 SEQF2796 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_952 TM7x (705,138 bps in 1 contig) — 1/1 16S rRNA (1,464 nt) 👄 0.0 HMT-952 SEQF3101 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_952 TM7x (705,178 bps in 1 contig) — 1/1 16S rRNA (1,464 nt) 👄 0.0 0.001147870 HMT-488 SEQF3144 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 FS03P (858,111 bps in 1 contig) — 1/1 16S rRNA (1,567 nt) 👄 0.003730298 HMT-488 SEQF3134 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 FS15P (931,438 bps in 1 contig) — 1/1 16S rRNA (1,567 nt) 👄 0.003067866 HMT-488 SEQF3133 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 FS13P (831,234 bps in 1 contig) — 1/1 16S rRNA (1,568 nt) 👄 0.000965496 HMT-488 SEQF3139 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 CM002 (877,855 bps in 1 contig) — 1/1 16S rRNA (1,567 nt) 👄 0.002048965 0.931 0.002018220 0.715 0.000530610 HMT-488 SEQF3098 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 AC001 (889,964 bps in 1 contig) — 1/1 16S rRNA (1,560 nt) 👄 0.000505297 HMT-488 SEQF3137 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 AC002 (847,999 bps in 1 contig) — 1/1 16S rRNA (1,568 nt) 👄 0.0 HMT-488 SEQF3170 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 HB001 (847,999 bps in 1 contig) — 1/1 16S rRNA (1,568 nt) 👄 0.0 0.000000006 0.991 0.004629710 HMT-488 SEQF3131 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 FS05P-B (853,179 bps in 1 contig) — 1/1 16S rRNA (1,567 nt) 👄 0.003833675 HMT-488 SEQF3138 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 CM001 (856,991 bps in 1 contig) — 1/1 16S rRNA (1,568 nt) 👄 0.001769623 0.939 0.002606724 HMT-488 SEQF3132 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 FS07P-B (848,784 bps in 1 contig) — 1/1 16S rRNA (1,567 nt) 👄 0.003147850 HMT-488 SEQF3141 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 CM006 (893,660 bps in 1 contig) — 1/1 16S rRNA (1,472 nt) 👄 0.002356200 HMT-488 SEQF3143 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_488 CM010 (839,600 bps in 1 contig) — 1/1 16S rRNA (1,472 nt) 👄 0.000000005 0.992 0.004811806 0.918 0.003215222 0.956 0.002819935 0.984 0.004634105 0.953 0.003353941 0.997 0.005878329 0.948 0.003850354 1.000 0.038430144 0.975 0.014267790 0.937 0.015932109 0.992 0.019795041 0.787 0.014347958 0.943 0.018802776 1.000 0.123734867 HMT-812 SEQF1245 Helicobacter pylori J99 (1,643,831 bps in 1 contig) — 1/2 16S rRNAs (1,491 nt) 0.000000005 HMT-812 SEQF1245 Helicobacter pylori J99 (1,643,831 bps in 1 contig) — 2/2 16S rRNAs (1,491 nt) 0.000549696 0.734 0.000560189 HMT-812 SEQF1644 Helicobacter pylori P12 (1,684,038 bps in 2 contigs) — 1/2 16S rRNAs (1,492 nt) 0.0 HMT-812 SEQF1644 Helicobacter pylori P12 (1,684,038 bps in 2 contigs) — 2/2 16S rRNAs (1,492 nt) 0.0 0.001103420 HMT-812 SEQF1244 Helicobacter pylori HPAG1 (1,605,736 bps in 2 contigs) — 1/2 16S rRNAs (1,491 nt) 0.0 HMT-812 SEQF1244 Helicobacter pylori HPAG1 (1,605,736 bps in 2 contigs) — 2/2 16S rRNAs (1,491 nt) 0.0 0.000551704 HMT-812 SEQF2409 Helicobacter pylori India7 (1,675,918 bps in 1 contig) — 1/2 16S rRNAs (1,492 nt) 0.0 HMT-812 SEQF2409 Helicobacter pylori India7 (1,675,918 bps in 1 contig) — 2/2 16S rRNAs (1,492 nt) 0.0 0.000548560 HMT-812 SEQF1243 Helicobacter pylori 52 (1,568,826 bps in 1 contig) — 1/2 16S rRNAs (1,493 nt) 0.0 HMT-812 SEQF1243 Helicobacter pylori 52 (1,568,826 bps in 1 contig) — 2/2 16S rRNAs (1,493 nt) 0.0 0.000000006 HMT-812 SEQF1351 Helicobacter pylori 98-10 (1,571,772 bps in 51 contigs) — 1/1 16S rRNA (1,493 nt) 0.001650020 HMT-812 SEQF1119 Helicobacter pylori Shi470 (1,608,548 bps in 1 contig) — 1/2 16S rRNAs (1,493 nt) 0.0 HMT-812 SEQF1119 Helicobacter pylori Shi470 (1,608,548 bps in 1 contig) — 2/2 16S rRNAs (1,493 nt) 0.0 0.001094793 0.000 0.000000005 0.925 0.000552129 0.000 0.000000005 HMT-812 SEQF1643 Helicobacter pylori G27 (1,663,013 bps in 2 contigs) — 1/2 16S rRNAs (1,492 nt) 0.0 HMT-812 SEQF1643 Helicobacter pylori G27 (1,663,013 bps in 2 contigs) — 2/2 16S rRNAs (1,492 nt) 0.0 0.000000005 HMT-812 SEQF1714 Helicobacter pylori B38 (1,576,758 bps in 1 contig) — 1/2 16S rRNAs (1,492 nt) 0.0 HMT-812 SEQF1714 Helicobacter pylori B38 (1,576,758 bps in 1 contig) — 2/2 16S rRNAs (1,492 nt) 0.0 0.000549787 HMT-812 SEQF2410 Helicobacter pylori Lithuania75 (1,640,673 bps in 2 contigs) — 1/2 16S rRNAs (1,492 nt) 0.0 HMT-812 SEQF2410 Helicobacter pylori Lithuania75 (1,640,673 bps in 2 contigs) — 2/2 16S rRNAs (1,492 nt) 0.0 0.001650366 HMT-812 SEQF1352 Helicobacter pylori B128 (1,649,221 bps in 73 contigs) — 1/1 16S rRNA (1,491 nt) 0.001096110 HMT-812 SEQF1240 Helicobacter pylori 26695 (1,667,867 bps in 1 contig) — 1/2 16S rRNAs (1,489 nt) 0.003321271 HMT-812 SEQF1240 Helicobacter pylori 26695 (1,667,867 bps in 1 contig) — 2/2 16S rRNAs (1,488 nt) 0.001098657 0.870 0.001098231 0.771 0.000551783 0.000 0.000000005 0.857 0.000549068 0.000 0.000000005 0.909 0.001096699 0.756 0.000541608 0.569 0.001670634 1.000 0.069320865 HMT-643 SEQF3521 Prevotella intermedia ZT (2,790,340 bps in 168 contigs) — 1/3 16S rRNAs (490 nt) 👄 0.000000005 HMT-643 SEQF3521 Prevotella intermedia ZT (2,790,340 bps in 168 contigs) — 2/3 16S rRNAs (489 nt) 👄 0.005552234 0.954 0.009893658 HMT-842 SEQF2614 Campylobacter ureolyticus DSM 20703 (1,740,590 bps in 35 contigs) — 1/1 16S rRNA (1,500 nt) 0.002058011 HMT-842 SEQF2613 Campylobacter ureolyticus ACS-301-V-Sch3b (1,698,455 bps in 7 contigs) — 1/2 16S rRNAs (1,500 nt) 0.0 HMT-842 SEQF2613 Campylobacter ureolyticus ACS-301-V-Sch3b (1,698,455 bps in 7 contigs) — 2/2 16S rRNAs (1,500 nt) 0.0 0.001037785 0.257 0.001572451 1.000 0.035840041 HMT-776 SEQF3088 Campylobacter sputorum INTA08/209 (1,780,580 bps in 51 contigs) — 1/1 16S rRNA (1,501 nt) 0.020626803 HMT-623 SEQF2434 Campylobacter gracilis RM3268 (2,255,573 bps in 33 contigs) — 1/1 16S rRNA (1,501 nt) 👄 0.023979298 HMT-748 SEQF1575 Campylobacter rectus RM3267 (2,513,107 bps in 89 contigs) — 1/1 16S rRNA (1,499 nt) 👄 0.002683095 HMT-763 SEQF2476 Campylobacter showae CC57C (2,187,351 bps in 273 contigs) — 1/1 16S rRNA (1,499 nt) 👄 0.000323888 HMT-763 SEQF1731 Campylobacter showae RM3277 (2,072,007 bps in 33 contigs) — 1/1 16S rRNA (1,499 nt) 👄 0.000000005 HMT-763 SEQF2416 Campylobacter showae CSUNSWCD (2,125,173 bps in 23 contigs) — 1/1 16S rRNA (1,499 nt) 👄 0.001049831 0.832 0.001252801 0.999 0.012858512 0.991 0.012312315 0.995 0.009555426 HMT-580 SEQF2488 Campylobacter curvus DSM 6644 (1,954,904 bps in 8 contigs) — 1/1 16S rRNA (1,639 nt) 👄 0.006276811 HMT-580 SEQF1178 Campylobacter curvus 525.92 (1,971,270 bps in 1 contig) — 1/3 16S rRNAs (1,701 nt) 👄 0.0 HMT-580 SEQF1178 Campylobacter curvus 525.92 (1,971,270 bps in 1 contig) — 2/3 16S rRNAs (1,701 nt) 👄 0.0 HMT-580 SEQF1178 Campylobacter curvus 525.92 (1,971,270 bps in 1 contig) — 3/3 16S rRNAs (1,701 nt) 👄 0.0 0.021055101 0.971 0.010402643 HMT-575 SEQF2579 Campylobacter concisus ATCC 51562 (1,841,750 bps in 21 contigs) — 1/1 16S rRNA (1,499 nt) 👄 0.000517215 HMT-575 SEQF2578 Campylobacter concisus ATCC 51561 (1,995,701 bps in 69 contigs) — 1/1 16S rRNA (1,499 nt) 👄 0.001022383 HMT-575 SEQF2326 Campylobacter concisus UNSWCD (1,778,912 bps in